PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010109363.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family C2H2
Protein Properties Length: 490aa    MW: 54649.1 Da    PI: 7.1977
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010109363.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.90.000337091223
                    EETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  2 kCpdCgksFsrksnLkrHirtH 23
                    +C+ Cgk F +   L  H+ +H
  XP_010109363.1 70 VCKECGKGFQSLKALCGHMASH 91
                    6******************999 PP

2zf-C2H211.70.00082341363123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     y+C  C+k+F+++  L  H  +H
  XP_010109363.1 341 YECLTCNKTFKSHRALGGHRANH 363
                     99*************99999887 PP

3zf-C2H211.10.0012420442123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++Cp+C ++F++   L  H r+H
  XP_010109363.1 420 HECPICFRMFKSGQALGGHKRSH 442
                     79******************999 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5015710.2636996IPR007087Zinc finger, C2H2
SMARTSM003550.0636991IPR015880Zinc finger, C2H2-like
PROSITE patternPS0002807191IPR007087Zinc finger, C2H2
PfamPF139122.2E-77193IPR007087Zinc finger, C2H2
SuperFamilySSF576672.88E-6341363No hitNo description
PROSITE profilePS501579.743341368IPR007087Zinc finger, C2H2
PfamPF139126.3E-7341365IPR007087Zinc finger, C2H2
SMARTSM003550.15341363IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280343363IPR007087Zinc finger, C2H2
SuperFamilySSF576672.88E-6415442No hitNo description
PROSITE profilePS501578.891420442IPR007087Zinc finger, C2H2
PfamPF139129.2E-9420442IPR007087Zinc finger, C2H2
SMARTSM003550.3420442IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280422442IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 490 aa     Download sequence    Send to blast
MECGILQPDT RTHVKKTEIS SEEVSRKLKS DDQSVRMSQK NSGSDLAANY VLRENPKKTK  60
RFGDSKEQKV CKECGKGFQS LKALCGHMAS HSDKDKMVKK FQEQKLVMDG HSDTETSGPR  120
QKRRVSNKRI IRYKNLDVYS GSSSVSGIEQ EQQEVAISLM LLSRDSGYKG GLDLNLNSLA  180
DSSDNNSVVL EAKSSSIDMN MNKVANFDEE KLKSGVGASV SENSDSGYFR NGPKKIESDV  240
SVDGFLKNGE FRKLEVESGS GIGANKLGIS DEKSGQLGKR ILVDEEEKDE ENCRGSSKYE  300
LRKRTKNGLY RGEALMESCK DESNYAFKSE ICRNFEKRSK YECLTCNKTF KSHRALGGHR  360
ANHSKINGCC EPICESGENN IENDNSTPEE AKIIENGAGK TPIREDFIER KSGSKKSRGH  420
ECPICFRMFK SGQALGGHKR SHFVGGREAN STMVIREEEP PEAEITVLFD LNLPAPMEED  480
NNEDVEFMAW
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010109363.10.0Zinc finger protein ZAT4
TrEMBLW9SRB90.0W9SRB9_9R
STRINGVIT_01s0011g00710.t011e-116(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF11013080
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26610.12e-63C2H2-like zinc finger protein